D. V. Severinov: search on Z-Library

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1

A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase

Ross, W, Gosink, K., Salomon, J, Igarashi, K, Zou, C, Ishihama, A, Severinov, K, Gourse, R.

Journal:

Year:

1993

Language:

english

File:

PDF, 2.43 MB

english, 1993

2

Hyperbranched poly(Î²-amino ester) based polyplex nanopaticles for delivery of CRISPR/Cas9 system and treatment of HPV infection associated cervical cancer

Gao, Xueqin, Jin, Zhuang, Tan, Xiangyu, Zhang, Chong, Zou, Chenming, Zhang, Wei, Ding, Jiahui, Das, Bhudev C., Severinov, Konstantin, Hitzeroth, Inga Isabel, Debata, Priya Ranjan, He, Dan, Ma, Xin, Ti

Journal:

Journal of Controlled Release

Year:

2020

Language:

english

File:

PDF, 32.34 MB

english, 2020

3

C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector

Abudayyeh, O. O., Gootenberg, J. S., Konermann, S., Joung, J., Slaymaker, I. M., Cox, D. B. T., Shmakov, S., Makarova, K. S., Semenova, E., Minakhin, L., Severinov, K., Regev, A., Lander, E. S., Kooni

Journal:

Year:

2016

Language:

english

File:

PDF, 2.60 MB

english, 2016

4

Efficient in vivo synthesis of lasso peptide pseudomycoidin proceeds in the absence of both the leader and the leader peptidase

Zyubko, Tatyana, Serebryakova, Marina, Andreeva, Julia, Metelev, Mikhail, Lippens, Guy, Dubiley, Svetlana, Severinov, Konstantin

Journal:

Chemical Science

Year:

2019

File:

PDF, 871 KB

2019

5

Structure Studies of the CRISPR-Csm Complex Reveal Mechanism of Co-transcriptional Interference

You, Lilan, Ma, Jun, Wang, Jiuyu, Artamonova, Daria, Wang, Min, Liu, Liang, Xiang, Hua, Severinov, Konstantin, Zhang, Xinzheng, Wang, Yanli

Journal:

Year:

2018

Language:

english

File:

PDF, 12.59 MB

english, 2018

6

Diversity and evolution of class 2 CRISPR–Cas systems

Shmakov, Sergey, Smargon, Aaron, Scott, David, Cox, David, Pyzocha, Neena, Yan, Winston, Abudayyeh, Omar O., Gootenberg, Jonathan S., Makarova, Kira S., Wolf, Yuri I., Severinov, Konstantin, Zhang, Fe

Journal:

Nature Reviews Microbiology

Year:

2017

Language:

english

File:

PDF, 634 KB

english, 2017

7

Novel Fri1-like Viruses Infecting Acinetobacter baumannii—vB_AbaP_AS11 and vB_AbaP_AS12—Characterization, Comparative Genomic Analysis, and Host-Recognition Strategy.

Popova, Anastasia, Lavysh, Daria, Klimuk, Evgeniy, Edelstein, Mikhail, Bogun, Alexander, Shneider, Mikhail, Goncharov, Artemiy, Leonov, Sergey, Severinov, Konstantin

Journal:

Year:

2017

Language:

english

File:

PDF, 6.79 MB

english, 2017

8

Detection of spacer precursors formed in vivo during primed CRISPR adaptation

Shiriaeva, Anna A., Savitskaya, Ekaterina, Datsenko, Kirill A., Vvedenskaya, Irina O., Fedorova, Iana, Morozova, Natalia, Metlitskaya, Anastasia, Sabantsev, Anton, Nickels, Bryce E., Severinov, Konsta

Journal:

Nature Communications

Year:

2019

Language:

english

File:

PDF, 2.77 MB

english, 2019

9

RNA polymerase – The third class of primases

N. Zenkin, K. Severinov

Journal:

Cellular and Molecular Life Sciences

Year:

2008

Language:

english

File:

PDF, 665 KB

english, 2008

10

Structure of Microcin J25, a Peptide Inhibitor of Bacterial RNA Polymerase, is a Lassoed Tail

Wilson, Kelly-Anne, Kalkum, Markus, Ottesen, Jennifer, Yuzenkova, Julia, Chait, Brian T., Landick, Robert, Muir, Tom, Severinov, Konstantin, Darst, Seth A.

Journal:

Journal of the American Chemical Society

Year:

2003

Language:

english

File:

PDF, 502 KB

english, 2003

11

The Escherichia coli Yej Transporter Is Required for the Uptake of Translation Inhibitor Microcin C

Novikova, M., Metlitskaya, A., Datsenko, K., Kazakov, T., Kazakov, A., Wanner, B., Severinov, K.

Journal:

Journal of Bacteriology

Year:

2007

Language:

english

File:

PDF, 372 KB

english, 2007

12

The Antibacterial Threaded-lasso Peptide Capistruin Inhibits Bacterial RNA Polymerase

Konstantin Kuznedelov, Ekaterina Semenova, Thomas A. Knappe, Damir Mukhamedyarov, Aashish Srivastava, Sujoy Chatterjee, Richard H. Ebright, Mohamed A. Marahiel, Konstantin Severinov

Journal:

Journal of Molecular Biology

Year:

2011

Language:

english

File:

PDF, 513 KB

english, 2011

13

Genome of Xanthomonas oryzae Bacteriophage Xp10: An Odd T-Odd Phage

Julia Yuzenkova, Sergei Nechaev, Jana Berlin, Dragana Rogulja, Konstantin Kuznedelov, Ross Inman, Arcady Mushegian, Konstantin Severinov

Journal:

Journal of Molecular Biology

Year:

2003

Language:

english

File:

PDF, 1.92 MB

english, 2003

14

Increasing the fuel utilization efficiency of RBMK-1000 reactors

V. G. Aden, A. A. Petrov, A. I. Kupalov-Yaropolk, E. K. Kovalenko, D. V. Severinov, V. M. Panin, A. M. Fedosov, A. V. Krayushkin, E. V. Burlakov

Journal:

Year:

2007

Language:

english

File:

PDF, 153 KB

english, 2007

15

Crystal Structure of Thermus aquaticus Core RNA Polymerase at 3.3 Å Resolution

Gongyi Zhang, Elizabeth A Campbell, Leonid Minakhin, Catherine Richter, Konstantin Severinov, Seth A Darst

Journal:

Year:

1999

Language:

english

File:

PDF, 947 KB

english, 1999

16

The use of “artificial viscosity” in the numerical solution of an inverse problem of gas dynamics

Journal:

USSR Computational Mathematics and Mathematical Physics

Year:

1965

Language:

english

File:

PDF, 457 KB

english, 1965

17

Calculation of the supersonic part of the disturbed region for supersonic non-equilibrium flow past a blunt body

Journal:

USSR Computational Mathematics and Mathematical Physics

Year:

1968

Language:

english

File:

PDF, 830 KB

english, 1968

18

Exploring the substrate promiscuity of an antibiotic inactivating enzyme

Agarwal, Vinayak, Vondenhoff, Gaston, Gadakh, Bharat, Severinov, Konstantin, Van Aerschot, Arthur, Nair, Satish K.

Journal:

Year:

2014

Language:

english

File:

PDF, 443 KB

english, 2014

19

Reorganisation of an RNA polymerase–promoter DNA complex for DNA melting

Burrows, Patricia C, Severinov, Konstantin, Buck, Martin, Wigneshweraraj, Siva R

Journal:

The EMBO Journal

Year:

2004

Language:

english

File:

PDF, 341 KB

english, 2004

20

Region 1.2 of the RNA polymerase σ subunit controls recognition of the −10 promoter element

Zenkin, Nikolay, Kulbachinskiy, Andrey, Yuzenkova, Yuliya, Mustaev, Arkady, Bass, Irina, Severinov, Konstantin, Brodolin, Konstantin

Journal:

The EMBO Journal

Year:

2007

Language:

english

File:

PDF, 477 KB

english, 2007

21

Crystal Structure of Escherichia coli Rnk, a New RNA Polymerase-Interacting Protein

Valerie Lamour, Steven T. Rutherford, Konstantin Kuznedelov, Udupi A. Ramagopal, Richard L. Gourse, Konstantin Severinov, Seth A. Darst

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 1.38 MB

english, 2008

22

Molecular Mechanism of Transcription Inhibition by Phage T7 gp2 Protein

Vladimir Mekler, Leonid Minakhin, Carol Sheppard, Sivaramesh Wigneshweraraj, Konstantin Severinov

Journal:

Journal of Molecular Biology

Year:

2011

Language:

english

File:

PDF, 521 KB

english, 2011

23

Host RNA polymerase inhibitors encoded by ϕKMV-like phages of pseudomonas

Klimuk, Evgeny, Akulenko, Natalia, Makarova, Kira S., Ceyssens, Pieter-Jan, Volchenkov, Ivan, Lavigne, Rob, Severinov, Konstantin

Journal:

Year:

2013

Language:

english

File:

PDF, 632 KB

english, 2013

24

An electromagnetic vibrator fixed on a screen initiates gas breakdown in the subcritical field of a microwave beam

Aleksandrov, K. V., Grachev, L. P., Esakov, I. I., Severinov, L. G.

Journal:

Technical Physics Letters

Year:

2014

Language:

english

File:

PDF, 178 KB

english, 2014

25

Distinct pathways of RNA polymerase regulation by a phage-encoded factor

Esyunina, Daria, Klimuk, Evgeny, Severinov, Konstantin, Kulbachinskiy, Andrey

Journal:

Proceedings of the National Academy of Sciences

Year:

2015

Language:

english

File:

PDF, 973 KB

english, 2015

26

Structural Modules of the Large Subunits of RNA Polymerase: INTRODUCING ARCHAEBACTERIAL AND CHLOROPLAST SPLIT SITES IN THE AND ' SUBUNITS OF ESCHERICHIA COLI RNA POLYMERASE

Severinov, K., Mustaev, A., Kukarin, A., Muzzin, O., Bass, I., Darst, S. A., Goldfarb, A.

Journal:

Journal of Biological Chemistry

Year:

1996

Language:

english

File:

PDF, 771 KB

english, 1996

27

Mutations in and Monoclonal Antibody Binding to Evolutionary Hypervariable Region of Escherichia coli RNA Polymerase ' Subunit Inhibit Transcript Cleavage and Transcript Elongation

Zakharova, N., Bass, I., Arsenieva, E., Nikiforov, V., Severinov, K.

Journal:

Journal of Biological Chemistry

Year:

1998

Language:

english

File:

PDF, 1013 KB

english, 1998

28

Extended -10 Motif Is Critical for Activity of the cspA Promoter but Does Not Contribute to Low-Temperature Transcription

Phadtare, S., Severinov, K.

Journal:

Journal of Bacteriology

Year:

2005

Language:

english

File:

PDF, 155 KB

english, 2005

29

[Society of Petroleum Engineers SPE Russian Oil and Gas Exploration and Production Technical Conference and Exhibition - Moscow, Russia (2012-10-16)] SPE Russian Oil and Gas Exploration and Production Technical Conference and Exhibition - Well Test for In-Situ Determination of Oil and Water Relative Permeabilities (Russian)

Zakirov, S. N., Indrupskiy, I. M., Zakirov, Ernest Sumbatovich, Anikeev, D. P., Vasiliev, I. V., Severinov, E. V., Gaidukov, L. A., Rodionov, A. E., Lachugin, D. S., Tsagan-Mandjiev, T. N.

Language:

russian

File:

PDF, 1.64 MB

russian

30

Histidine-Triad Hydrolases Provide Resistance to Peptide-Nucleotide Antibiotics

Yagmurov, Eldar, Tsibulskaya, Darya, Livenskyi, Alexey, Serebryakova, Marina, Wolf, Yury I., Borukhov, Sergei, Severinov, Konstantin, Dubiley, Svetlana, Gottesman, Susan

Journal:

Year:

2020

File:

PDF, 1.82 MB

2020

31

CspB and CspL, thermostable cold-shock proteins from Thermotoga maritima

Sangita Phadtare, Jihwan Hwang, Konstantin Severinov, Masayori Inouye

Journal:

Year:

2003

Language:

english

File:

PDF, 283 KB

english, 2003

32

Regulated communication between the upstream face of RNA polymerase and the β′ subunit jaw domain

Wigneshweraraj, Siva R, Burrows, Patricia C, Nechaev, Sergei, Zenkin, Nikolay, Severinov, Konstantin, Buck, Martin

Journal:

The EMBO Journal

Year:

2004

Language:

english

File:

PDF, 271 KB

english, 2004

33

Regulation of RNA Polymerase Promoter Selectivity by Covalent Modification of DNA

Marina Zakharova, Leonid Minakhin, Alexander Solonin, Konstantin Severinov

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 871 KB

english, 2004

34

Structural and Functional Characterization of Microcin C Resistance Peptidase MccF from Bacillus anthracis

Boguslaw Nocek, Anton Tikhonov, Gyorgy Babnigg, Minyi Gu, Min Zhou, Kira S. Makarova, Gaston Vondenhoff, Arthur Van Aerschot, Keehwan Kwon, Wayne F. Anderson, Konstantin Severinov, Andrzej Joachimiak

Journal:

Journal of Molecular Biology

Year:

2012

Language:

english

File:

PDF, 2.69 MB

english, 2012

35

Role of the RNA polymerase sigma subunit in transcription initiation

Sergei Borukhov, Konstantin Severinov

Journal:

Research in Microbiology

Year:

2002

Language:

english

File:

PDF, 260 KB

english, 2002

36

Histidine-tagged RNA polymerase: dissection of the transcription cycle using immobilized enzyme

Kashlev, Mikhail, Martin, Emil, Polyakov, Andrey, Severinov, Konstantin, Nikiforov, Vadim, Goldfarb, Alex

Journal:

Year:

1993

Language:

english

File:

PDF, 869 KB

english, 1993

37

Cooperativity and Interaction Energy Threshold Effects in Recognition of the −10 Promoter Element by Bacterial RNA Polymerase

Mekler, Vladimir, Severinov, Konstantin

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 47 KB

english, 2014

38

Systematic Structure-Activity Analysis of Microcin J25

Pavlova, O., Mukhopadhyay, J., Sineva, E., Ebright, R. H., Severinov, K.

Journal:

Journal of Biological Chemistry

Year:

2008

Language:

english

File:

PDF, 800 KB

english, 2008

39

Ribosome-controlled transcription termination is essential for the production of antibiotic microcin C

Zukher, I., Novikova, M., Tikhonov, A., Nesterchuk, M. V., Osterman, I. A., Djordjevic, M., Sergiev, P. V., Sharma, C. M., Severinov, K.

Journal:

Nucleic Acids Research

Year:

2014

Language:

english

File:

PDF, 2.28 MB

english, 2014

40

Come Together: CRISPR-Cas Immunity Senses the Quorum

Semenova, Ekaterina, Severinov, Konstantin

Journal:

Year:

2016

Language:

english

File:

PDF, 617 KB

english, 2016

41

Full shut-off of Escherichia coli RNA-polymerase by T7 phage requires a small phage-encoded DNA-binding protein

Tabib-Salazar, Aline, Liu, Bing, Shadrin, Andrey, Burchell, Lynn, Wang, Zhexin, Wang, Zhihao, Goren, Moran G., Yosef, Ido, Qimron, Udi, Severinov, Konstantin, Matthews, Steve J., Wigneshweraraj, Sivar

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 3.83 MB

english, 2017

42

Xenogeneic Regulation of the Bacterial Transcription Machinery

Tabib-Salazar, Aline, Mulvenna, Nancy, Severinov, Konstantin, Matthews, Steve J., Wigneshweraraj, Sivaramesh

Journal:

Journal of Molecular Biology

Year:

2019

File:

PDF, 6.29 MB

2019

43

Phage T7 DNA mimic protein Ocr is a potent inhibitor of BREX defence

Isaev, Artem, Drobiazko, Alena, Sierro, Nicolas, Gordeeva, Julia, Yosef, Ido, Qimron, Udi, Ivanov, Nikolai V, Severinov, Konstantin

Journal:

Nucleic Acids Research

Year:

2020

File:

PDF, 1.33 MB

2020

44

Structure of Microcin J25, a Peptide Inhibitor of Bacterial RNA Polymerase, is a Lassoed Tail.

Kelly-Anne Wilson, Markus Kalkum, Jennifer Ottesen, Julia Yuzenkova, Brian T. Chait, Robert Landrick, Tom Kuir, Konstantin Severinov, Seth A. Darst

Journal:

Year:

2004

File:

PDF, 54 KB

2004

45

Mechanism design with partial state verifiability

Raymond Deneckere, Sergei Severinov

Journal:

Games and Economic Behavior

Year:

2008

Language:

english

File:

PDF, 270 KB

english, 2008

46

Temporal Regulation of Viral Transcription during Development of Thermus thermophilus Bacteriophage ϕYS40

Anastasiya Sevostyanova, Marko Djordjevic, Konstantin Kuznedelov, Tatyana Naryshkina, Mikhail S. Gelfand, Konstantin Severinov, Leonid Minakhin

Journal:

Journal of Molecular Biology

Year:

2007

Language:

english

File:

PDF, 2.01 MB

english, 2007

47

Transcription regulation by bacteriophage T4 AsiA

Leonid Minakhin, Konstantin Severinov

Journal:

Protein Expression and Purification

Year:

2005

Language:

english

File:

PDF, 407 KB

english, 2005

48

High-throughput analysis of type I-E CRISPR/Cas spacer acquisition in E. coli

Savitskaya, Ekaterina, Semenova, Ekaterina, Dedkov, Vladimir, Metlitskaya, Anastasia, Severinov, Konstantin

Journal:

Year:

2013

Language:

english

File:

PDF, 1.24 MB

english, 2013

49

Chemical Synthesis Enables Biochemical and Antibacterial Evaluation of Streptolydigin Antibiotics

Pronin, Sergey V., Martinez, Anthony, Kuznedelov, Konstantin, Severinov, Konstantin, Shuman, Howard A., Kozmin, Sergey A.

Journal:

Journal of the American Chemical Society

Year:

2011

Language:

english

File:

PDF, 2.13 MB

english, 2011

50

Characterization of Peptide Chain Length and Constituency Requirements for YejABEF-Mediated Uptake of Microcin C Analogues

Vondenhoff, G. H. M., Blanchaert, B., Geboers, S., Kazakov, T., Datsenko, K. A., Wanner, B. L., Rozenski, J., Severinov, K., Van Aerschot, A.

Journal:

Journal of Bacteriology

Year:

2011

Language:

english

File:

PDF, 1.09 MB

english, 2011

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